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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BLCA rs947921 chr9:18022602 A/C 4.87E-7 216 9.27 11.47 3.3 KM Plot
BLCA rs9650238 chr8:71992706 T/C 0.000147 212 7.93 12.4 10.88 KM Plot
BLCA rs967109 chr8:50829358 G/A 1.59E-5 216 10.53 9.03 0.98 KM Plot
BLCA rs967110 chr8:50829217 T/C 1.59E-5 216 10.53 9.03 0.98 KM Plot
BLCA rs967116 chr8:50824431 T/C 1.75E-5 215 10.33 9.03 0.98 KM Plot
BLCA rs9806410 chr15:40851755 C/T 0.000144 215 10.7 6.57 2.27 KM Plot
BLCA rs9853830 chr3:117574032 A/G 0.000131 215 6.57 2.48 10.13 KM Plot
BLCA rs990430 chr9:73881932 C/T 7.18E-7 216 3.3 13 9.05 KM Plot
BLCA rs9944864 chr18:47129951 A/G 0 216 1.87 13.03 9.05 KM Plot
BLCA rs9946871 chr18:61173831 C/G 7.39E-6 216 4.07 15.9 8.7 KM Plot
BLCA rs9991861 chr4:185933108 C/T 6.68E-11 216 2.27 12.7 9.03 KM Plot
BRCA rs10014534 chr4:14279310 A/C 8.6E-7 1028 18.3 17.32 21.93 KM Plot
BRCA rs10083937 chr18:44695602 A/G 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs10146486 chr14:70261026 A/G 1.27E-6 1028 21.43 22.18 26.57 KM Plot
BRCA rs10161011 chr12:21582806 C/T 4.65E-5 982 20.8 23.88 21.43 KM Plot